Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HTR1EP28566 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HTR1EP28566 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.29□□□□□ -0.12
HTR1EP28566 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HTR1EP28566 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.29□□□□□ -0.12
HTR1EP28566 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HTR1EP28566 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HTR1EP28566 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HTR1EP28566 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.29□□□□□ -0.12
HTR1EP28566 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HTR1EP28566 AC090505.1-201ENST00000430515 1834 ntBASIC14.29□□□□□ -0.12
HTR1EP28566 INE2-201ENST00000630399 1874 ntBASIC14.29□□□□□ -0.12
HTR1EP28566 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HTR1EP28566 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HTR1EP28566 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
HTR1EP28566 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HTR1EP28566 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.29□□□□□ -0.12
HTR1EP28566 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HTR1EP28566 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.28□□□□□ -0.12
HTR1EP28566 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
HTR1EP28566 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
HTR1EP28566 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.28□□□□□ -0.12
HTR1EP28566 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.28□□□□□ -0.12
HTR1EP28566 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 TMEM198B-204ENST00000484016 896 ntBASIC14.28□□□□□ -0.12
HTR1EP28566 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.28□□□□□ -0.12
HTR1EP28566 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 SNX29P1-201ENST00000548357 1007 ntBASIC14.28□□□□□ -0.12
HTR1EP28566 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 KRT8P24-201ENST00000560290 1559 ntBASIC14.28□□□□□ -0.12
HTR1EP28566 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HTR1EP28566 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.28□□□□□ -0.12
HTR1EP28566 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 MIR4538-201ENST00000581377 78 ntBASIC14.28□□□□□ -0.12
HTR1EP28566 RN7SL219P-201ENST00000582872 296 ntBASIC14.28□□□□□ -0.12
HTR1EP28566 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 AC015936.2-201ENST00000593177 259 ntBASIC14.28□□□□□ -0.12
HTR1EP28566 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 AC000095.1-201ENST00000603208 874 ntBASIC14.28□□□□□ -0.12
HTR1EP28566 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.28□□□□□ -0.12
HTR1EP28566 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.28□□□□□ -0.12
HTR1EP28566 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.28□□□□□ -0.12
HTR1EP28566 AL109936.8-201ENST00000641772 604 ntBASIC14.28□□□□□ -0.12
HTR1EP28566 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HTR1EP28566 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HTR1EP28566 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.28□□□□□ -0.12
HTR1EP28566 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HTR1EP28566 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HTR1EP28566 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.28□□□□□ -0.12
HTR1EP28566 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.27□□□□□ -0.12
HTR1EP28566 ST20-AS1-201ENST00000560255 4223 ntBASIC14.27□□□□□ -0.12
HTR1EP28566 AL157414.3-201ENST00000624276 1954 ntBASIC14.27□□□□□ -0.12
HTR1EP28566 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
HTR1EP28566 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.12
HTR1EP28566 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HTR1EP28566 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HTR1EP28566 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
HTR1EP28566 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HTR1EP28566 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HTR1EP28566 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HTR1EP28566 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HTR1EP28566 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.27□□□□□ -0.12
HTR1EP28566 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HTR1EP28566 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HTR1EP28566 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.27□□□□□ -0.12
HTR1EP28566 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HTR1EP28566 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HTR1EP28566 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HTR1EP28566 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
HTR1EP28566 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.27□□□□□ -0.13
HTR1EP28566 KRT43P-201ENST00000434019 910 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms