Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ABCD3P28288 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCD3P28288 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCD3P28288 AC007686.3-201ENST00000619017 3487 ntBASIC13.7□□□□□ -0.22
ABCD3P28288 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ABCD3P28288 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.7□□□□□ -0.22
ABCD3P28288 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ABCD3P28288 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ABCD3P28288 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ABCD3P28288 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 MRPL37P1-201ENST00000592451 1337 ntBASIC13.69□□□□□ -0.22
ABCD3P28288 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCD3P28288 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ABCD3P28288 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCD3P28288 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ABCD3P28288 AC244107.1-201ENST00000442033 332 ntBASIC13.69□□□□□ -0.22
ABCD3P28288 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ABCD3P28288 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.69□□□□□ -0.22
ABCD3P28288 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.69□□□□□ -0.22
ABCD3P28288 RN7SL560P-201ENST00000577943 264 ntBASIC13.69□□□□□ -0.22
ABCD3P28288 EEF1DP1-201ENST00000585891 896 ntBASIC13.69□□□□□ -0.22
ABCD3P28288 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.69□□□□□ -0.22
ABCD3P28288 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCD3P28288 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ABCD3P28288 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ABCD3P28288 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCD3P28288 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCD3P28288 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.68□□□□□ -0.22
ABCD3P28288 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
ABCD3P28288 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.68□□□□□ -0.22
ABCD3P28288 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.68□□□□□ -0.22
ABCD3P28288 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ABCD3P28288 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
ABCD3P28288 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 AC079178.1-201ENST00000420915 656 ntBASIC13.68□□□□□ -0.22
ABCD3P28288 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.68□□□□□ -0.22
ABCD3P28288 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.68□□□□□ -0.22
ABCD3P28288 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.68□□□□□ -0.22
ABCD3P28288 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.68□□□□□ -0.22
ABCD3P28288 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.68□□□□□ -0.22
ABCD3P28288 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ABCD3P28288 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.68□□□□□ -0.22
ABCD3P28288 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.68□□□□□ -0.22
ABCD3P28288 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.68□□□□□ -0.22
ABCD3P28288 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
ABCD3P28288 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.68□□□□□ -0.22
ABCD3P28288 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ABCD3P28288 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ABCD3P28288 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms