Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.12□□□□□ -0.15
LAMA1P25391 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.12□□□□□ -0.15
LAMA1P25391 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.12□□□□□ -0.15
LAMA1P25391 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 WASH3P-207ENST00000560956 1394 ntBASIC14.12□□□□□ -0.15
LAMA1P25391 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LAMA1P25391 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.12□□□□□ -0.15
LAMA1P25391 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.12□□□□□ -0.15
LAMA1P25391 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LAMA1P25391 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.12□□□□□ -0.15
LAMA1P25391 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.12□□□□□ -0.15
LAMA1P25391 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LAMA1P25391 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 AC013553.1-201ENST00000560906 267 ntBASIC14.12□□□□□ -0.15
LAMA1P25391 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.12□□□□□ -0.15
LAMA1P25391 MSANTD2P1-201ENST00000445341 1368 ntBASIC14.12□□□□□ -0.15
LAMA1P25391 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LAMA1P25391 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.12□□□□□ -0.15
LAMA1P25391 MTHFR-210ENST00000641407 2387 ntBASIC14.12□□□□□ -0.15
LAMA1P25391 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.12□□□□□ -0.15
LAMA1P25391 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.12□□□□□ -0.15
LAMA1P25391 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LAMA1P25391 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.11□□□□□ -0.15
LAMA1P25391 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 AC004554.1-201ENST00000422830 1468 ntBASIC14.11□□□□□ -0.15
LAMA1P25391 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC14.11□□□□□ -0.15
LAMA1P25391 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.11□□□□□ -0.15
LAMA1P25391 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.11□□□□□ -0.15
LAMA1P25391 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.11□□□□□ -0.15
LAMA1P25391 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
LAMA1P25391 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LAMA1P25391 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LAMA1P25391 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.11□□□□□ -0.15
LAMA1P25391 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.11□□□□□ -0.15
LAMA1P25391 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 LINC02486-201ENST00000604157 3000 ntBASIC14.11□□□□□ -0.15
LAMA1P25391 MIR645-201ENST00000385283 94 ntBASIC14.11□□□□□ -0.15
LAMA1P25391 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LAMA1P25391 AL035414.1-201ENST00000451327 857 ntBASIC14.11□□□□□ -0.15
LAMA1P25391 AC090136.2-201ENST00000517809 420 ntBASIC14.11□□□□□ -0.15
LAMA1P25391 AC226150.1-201ENST00000544259 466 ntBASIC14.11□□□□□ -0.15
LAMA1P25391 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.11□□□□□ -0.15
LAMA1P25391 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.11□□□□□ -0.15
LAMA1P25391 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.11□□□□□ -0.15
LAMA1P25391 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.11□□□□□ -0.15
LAMA1P25391 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
LAMA1P25391 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.11□□□□□ -0.15
LAMA1P25391 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LAMA1P25391 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.11□□□□□ -0.15
LAMA1P25391 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC14.11□□□□□ -0.15
LAMA1P25391 AC098934.1-203ENST00000442868 1262 ntBASIC14.11□□□□□ -0.15
LAMA1P25391 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.11□□□□□ -0.15
LAMA1P25391 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
LAMA1P25391 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LAMA1P25391 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.1□□□□□ -0.15
LAMA1P25391 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.1□□□□□ -0.15
LAMA1P25391 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LAMA1P25391 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.1□□□□□ -0.15
LAMA1P25391 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.1□□□□□ -0.15
LAMA1P25391 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.1□□□□□ -0.15
LAMA1P25391 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.1□□□□□ -0.15
LAMA1P25391 OR5BD1P-201ENST00000532527 817 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms