Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC21.16■□□□□ 0.98
CHGAP10645 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC21.16■□□□□ 0.98
CHGAP10645 CHCHD2P9-201ENST00000461726 456 ntBASIC21.16■□□□□ 0.98
CHGAP10645 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC21.16■□□□□ 0.98
CHGAP10645 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC21.16■□□□□ 0.98
CHGAP10645 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC21.16■□□□□ 0.98
CHGAP10645 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC21.16■□□□□ 0.98
CHGAP10645 AC087392.5-201ENST00000612517 489 ntBASIC21.16■□□□□ 0.98
CHGAP10645 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHGAP10645 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHGAP10645 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGAP10645 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGAP10645 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC21.16■□□□□ 0.98
CHGAP10645 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGAP10645 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGAP10645 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHGAP10645 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHGAP10645 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGAP10645 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHGAP10645 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHGAP10645 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGAP10645 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHGAP10645 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGAP10645 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGAP10645 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC21.15■□□□□ 0.98
CHGAP10645 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGAP10645 WASH3P-207ENST00000560956 1394 ntBASIC21.15■□□□□ 0.98
CHGAP10645 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHGAP10645 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGAP10645 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC21.15■□□□□ 0.98
CHGAP10645 OR2R1P-201ENST00000441404 914 ntBASIC21.15■□□□□ 0.98
CHGAP10645 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC21.15■□□□□ 0.98
CHGAP10645 RPL18AP3-201ENST00000462885 528 ntBASIC21.15■□□□□ 0.98
CHGAP10645 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC21.15■□□□□ 0.98
CHGAP10645 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC21.15■□□□□ 0.98
CHGAP10645 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC21.15■□□□□ 0.98
CHGAP10645 MIR3180-2-201ENST00000581748 88 ntBASIC21.15■□□□□ 0.98
CHGAP10645 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHGAP10645 CICP23-201ENST00000605013 2741 ntBASIC21.15■□□□□ 0.98
CHGAP10645 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHGAP10645 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHGAP10645 SSR4P1-203ENST00000599569 2260 ntBASIC21.15■□□□□ 0.98
CHGAP10645 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHGAP10645 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHGAP10645 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC21.14■□□□□ 0.98
CHGAP10645 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHGAP10645 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CHGAP10645 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC21.14■□□□□ 0.98
CHGAP10645 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHGAP10645 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CHGAP10645 DUX4L50-201ENST00000455245 715 ntBASIC21.14■□□□□ 0.97
CHGAP10645 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHGAP10645 AC018463.1-201ENST00000456674 917 ntBASIC21.14■□□□□ 0.97
CHGAP10645 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC21.14■□□□□ 0.97
CHGAP10645 IGHV3-37-201ENST00000518544 340 ntBASIC21.14■□□□□ 0.97
CHGAP10645 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CHGAP10645 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC21.14■□□□□ 0.97
CHGAP10645 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CHGAP10645 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC21.14■□□□□ 0.97
CHGAP10645 AC073911.3-201ENST00000624401 631 ntBASIC21.14■□□□□ 0.97
CHGAP10645 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHGAP10645 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CHGAP10645 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHGAP10645 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC21.14■□□□□ 0.97
CHGAP10645 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CHGAP10645 PGR-210ENST00000619228 3038 ntTSL 5 BASIC21.14■□□□□ 0.97
CHGAP10645 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHGAP10645 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CHGAP10645 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHGAP10645 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC21.14■□□□□ 0.97
CHGAP10645 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHGAP10645 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHGAP10645 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CHGAP10645 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHGAP10645 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGAP10645 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGAP10645 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
CHGAP10645 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC21.13■□□□□ 0.97
CHGAP10645 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CHGAP10645 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGAP10645 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGAP10645 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
CHGAP10645 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGAP10645 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHGAP10645 MRPL37P1-201ENST00000592451 1337 ntBASIC21.13■□□□□ 0.97
CHGAP10645 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CHGAP10645 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGAP10645 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGAP10645 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGAP10645 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC21.13■□□□□ 0.97
CHGAP10645 KRT18P66-201ENST00000452970 1269 ntBASIC21.13■□□□□ 0.97
CHGAP10645 BUD31-205ENST00000456893 512 ntTSL 5 BASIC21.13■□□□□ 0.97
CHGAP10645 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHGAP10645 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC21.13■□□□□ 0.97
CHGAP10645 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHGAP10645 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CHGAP10645 AC084781.1-201ENST00000613737 656 ntBASIC21.13■□□□□ 0.97
CHGAP10645 MIR6858-201ENST00000620733 67 ntBASIC21.13■□□□□ 0.97
CHGAP10645 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CHGAP10645 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms