Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
FREM3P0C091 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.46□□□□□ -0.25
FREM3P0C091 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
FREM3P0C091 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.46□□□□□ -0.25
FREM3P0C091 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.46□□□□□ -0.25
FREM3P0C091 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 KRT8P13-201ENST00000463294 1010 ntBASIC13.46□□□□□ -0.25
FREM3P0C091 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.46□□□□□ -0.25
FREM3P0C091 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.46□□□□□ -0.25
FREM3P0C091 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 EEF1DP1-201ENST00000585891 896 ntBASIC13.46□□□□□ -0.25
FREM3P0C091 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.46□□□□□ -0.25
FREM3P0C091 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.46□□□□□ -0.25
FREM3P0C091 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
FREM3P0C091 AC244093.1-201ENST00000610837 814 ntBASIC13.46□□□□□ -0.25
FREM3P0C091 AC022748.3-201ENST00000621828 275 ntBASIC13.46□□□□□ -0.25
FREM3P0C091 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.46□□□□□ -0.25
FREM3P0C091 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.46□□□□□ -0.25
FREM3P0C091 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.46□□□□□ -0.25
FREM3P0C091 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.46□□□□□ -0.25
FREM3P0C091 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.46□□□□□ -0.25
FREM3P0C091 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
FREM3P0C091 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
FREM3P0C091 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
FREM3P0C091 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
FREM3P0C091 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
FREM3P0C091 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
FREM3P0C091 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.46□□□□□ -0.26
FREM3P0C091 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
FREM3P0C091 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
FREM3P0C091 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.46□□□□□ -0.26
FREM3P0C091 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
FREM3P0C091 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.46□□□□□ -0.26
FREM3P0C091 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
FREM3P0C091 IGHJ2P-201ENST00000454480 60 ntBASIC13.46□□□□□ -0.26
FREM3P0C091 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
FREM3P0C091 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.46□□□□□ -0.26
FREM3P0C091 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.46□□□□□ -0.26
FREM3P0C091 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.46□□□□□ -0.26
FREM3P0C091 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.46□□□□□ -0.26
FREM3P0C091 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.46□□□□□ -0.26
FREM3P0C091 AC005962.1-201ENST00000584100 773 ntBASIC13.46□□□□□ -0.26
FREM3P0C091 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.46□□□□□ -0.26
FREM3P0C091 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.46□□□□□ -0.26
FREM3P0C091 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
FREM3P0C091 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
FREM3P0C091 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
FREM3P0C091 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
FREM3P0C091 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
FREM3P0C091 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.45□□□□□ -0.26
FREM3P0C091 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
FREM3P0C091 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.45□□□□□ -0.26
FREM3P0C091 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
FREM3P0C091 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
FREM3P0C091 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.45□□□□□ -0.26
FREM3P0C091 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.45□□□□□ -0.26
FREM3P0C091 Z93015.1-201ENST00000451718 390 ntBASIC13.45□□□□□ -0.26
FREM3P0C091 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.45□□□□□ -0.26
FREM3P0C091 AC022217.1-201ENST00000521069 738 ntBASIC13.45□□□□□ -0.26
FREM3P0C091 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 MIR3615-201ENST00000581999 87 ntBASIC13.45□□□□□ -0.26
FREM3P0C091 AC005324.6-201ENST00000587972 613 ntBASIC13.45□□□□□ -0.26
FREM3P0C091 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.45□□□□□ -0.26
FREM3P0C091 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 AC007292.2-201ENST00000593524 1812 ntBASIC13.45□□□□□ -0.26
FREM3P0C091 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.45□□□□□ -0.26
FREM3P0C091 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
FREM3P0C091 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
FREM3P0C091 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.45□□□□□ -0.26
FREM3P0C091 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.45□□□□□ -0.26
FREM3P0C091 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
FREM3P0C091 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms