Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
APOC3P02656 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
APOC3P02656 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
APOC3P02656 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC3P02656 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOC3P02656 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC3P02656 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC3P02656 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.89□□□□□ -0.51
APOC3P02656 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC3P02656 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.89□□□□□ -0.51
APOC3P02656 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC3P02656 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC11.89□□□□□ -0.51
APOC3P02656 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC3P02656 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
APOC3P02656 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 AC005014.1-201ENST00000432006 2976 ntBASIC11.89□□□□□ -0.51
APOC3P02656 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
APOC3P02656 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.89□□□□□ -0.51
APOC3P02656 RN7SL832P-201ENST00000607781 1756 ntBASIC11.89□□□□□ -0.51
APOC3P02656 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
APOC3P02656 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC11.89□□□□□ -0.51
APOC3P02656 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
APOC3P02656 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC3P02656 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC3P02656 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 AL691432.1-201ENST00000596308 1422 ntBASIC11.88□□□□□ -0.51
APOC3P02656 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
APOC3P02656 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
APOC3P02656 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC3P02656 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 INGX-201ENST00000359239 846 ntBASIC11.88□□□□□ -0.51
APOC3P02656 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
APOC3P02656 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.88□□□□□ -0.51
APOC3P02656 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC3P02656 C1QBPP2-201ENST00000528754 825 ntBASIC11.88□□□□□ -0.51
APOC3P02656 AC107918.2-201ENST00000530817 355 ntBASIC11.88□□□□□ -0.51
APOC3P02656 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC3P02656 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC3P02656 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC3P02656 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
APOC3P02656 AC011840.4-201ENST00000578471 627 ntBASIC11.88□□□□□ -0.51
APOC3P02656 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC11.88□□□□□ -0.51
APOC3P02656 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
APOC3P02656 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.88□□□□□ -0.51
APOC3P02656 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
APOC3P02656 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.88□□□□□ -0.51
APOC3P02656 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms