Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.72■□□□□ 0.11
TIMP1P01033 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 KHSRPP1-201ENST00000427983 1768 ntBASIC15.72■□□□□ 0.11
TIMP1P01033 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.72■□□□□ 0.11
TIMP1P01033 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
TIMP1P01033 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.72■□□□□ 0.11
TIMP1P01033 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TIMP1P01033 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.71■□□□□ 0.11
TIMP1P01033 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TIMP1P01033 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.71■□□□□ 0.11
TIMP1P01033 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.71■□□□□ 0.11
TIMP1P01033 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TIMP1P01033 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TIMP1P01033 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC15.71■□□□□ 0.11
TIMP1P01033 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC15.71■□□□□ 0.11
TIMP1P01033 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC15.71■□□□□ 0.11
TIMP1P01033 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC15.71■□□□□ 0.11
TIMP1P01033 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.71■□□□□ 0.11
TIMP1P01033 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC15.71■□□□□ 0.11
TIMP1P01033 OR2A1-AS1-210ENST00000496968 531 ntBASIC15.71■□□□□ 0.11
TIMP1P01033 AC095040.1-201ENST00000513286 675 ntBASIC15.71■□□□□ 0.11
TIMP1P01033 AC090136.2-201ENST00000517809 420 ntBASIC15.71■□□□□ 0.11
TIMP1P01033 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.71■□□□□ 0.11
TIMP1P01033 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.71■□□□□ 0.11
TIMP1P01033 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.71■□□□□ 0.11
TIMP1P01033 SRP14-204ENST00000558720 780 ntTSL 2 BASIC15.71■□□□□ 0.11
TIMP1P01033 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.71■□□□□ 0.11
TIMP1P01033 NDUFB10P1-201ENST00000567319 521 ntBASIC15.71■□□□□ 0.11
TIMP1P01033 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.71■□□□□ 0.11
TIMP1P01033 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
TIMP1P01033 AC021016.3-201ENST00000608367 477 ntBASIC15.71■□□□□ 0.11
TIMP1P01033 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TIMP1P01033 FUCA1P1-201ENST00000374476 1351 ntBASIC15.71■□□□□ 0.11
TIMP1P01033 AC112693.3-201ENST00000624819 1983 ntBASIC15.71■□□□□ 0.1
TIMP1P01033 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TIMP1P01033 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TIMP1P01033 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMP1P01033 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TIMP1P01033 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TIMP1P01033 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.7■□□□□ 0.1
TIMP1P01033 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMP1P01033 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMP1P01033 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.7■□□□□ 0.1
TIMP1P01033 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.7■□□□□ 0.1
TIMP1P01033 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.7■□□□□ 0.1
TIMP1P01033 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.7■□□□□ 0.1
TIMP1P01033 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMP1P01033 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.7■□□□□ 0.1
TIMP1P01033 AC008972.2-201ENST00000606587 494 ntBASIC15.7■□□□□ 0.1
TIMP1P01033 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.7■□□□□ 0.1
TIMP1P01033 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 C18orf15-201ENST00000623680 2534 ntBASIC15.7■□□□□ 0.1
TIMP1P01033 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.7■□□□□ 0.1
TIMP1P01033 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TIMP1P01033 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
TIMP1P01033 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms