Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
ABCA1O95477 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.52□□□□□ -0.41
ABCA1O95477 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.52□□□□□ -0.41
ABCA1O95477 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
ABCA1O95477 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.52□□□□□ -0.41
ABCA1O95477 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.52□□□□□ -0.41
ABCA1O95477 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ABCA1O95477 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.52□□□□□ -0.41
ABCA1O95477 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 AL645937.2-201ENST00000396808 931 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 ACTG1P2-201ENST00000415776 1125 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 ACTG1P11-201ENST00000425411 1125 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA1O95477 RN7SL11P-201ENST00000471305 293 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.51□□□□□ -0.41
ABCA1O95477 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.51□□□□□ -0.41
ABCA1O95477 AC135983.4-201ENST00000564116 1262 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 MIR4683-201ENST00000579659 81 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 MIR4783-201ENST00000580343 82 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 BNIP3P13-201ENST00000599968 566 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 AL358472.3-201ENST00000608147 415 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 AP003419.4-201ENST00000616071 517 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA1O95477 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA1O95477 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA1O95477 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 AC007787.1-201ENST00000588095 1583 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 AL359258.3-201ENST00000622910 2331 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA1O95477 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
ABCA1O95477 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.51□□□□□ -0.41
ABCA1O95477 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 AC005324.6-201ENST00000587972 613 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.51□□□□□ -0.41
ABCA1O95477 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA1O95477 AL645728.2-202ENST00000641679 227 ntBASIC12.51□□□□□ -0.41
ABCA1O95477 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.51□□□□□ -0.41
ABCA1O95477 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ABCA1O95477 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.51□□□□□ -0.41
ABCA1O95477 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms