Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD4O95243 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD4O95243 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MBD4O95243 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD4O95243 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
MBD4O95243 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MBD4O95243 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD4O95243 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD4O95243 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD4O95243 KHSRPP1-201ENST00000427983 1768 ntBASIC17.62■□□□□ 0.41
MBD4O95243 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MBD4O95243 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD4O95243 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.62■□□□□ 0.41
MBD4O95243 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.62■□□□□ 0.41
MBD4O95243 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
MBD4O95243 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.62■□□□□ 0.41
MBD4O95243 AC016700.1-201ENST00000429424 312 ntBASIC17.62■□□□□ 0.41
MBD4O95243 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.62■□□□□ 0.41
MBD4O95243 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD4O95243 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD4O95243 HIST2H2BC-201ENST00000498492 580 ntBASIC17.62■□□□□ 0.41
MBD4O95243 SCARNA20.5-201ENST00000516991 142 ntBASIC17.62■□□□□ 0.41
MBD4O95243 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.62■□□□□ 0.41
MBD4O95243 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD4O95243 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.62■□□□□ 0.41
MBD4O95243 AL160314.3-201ENST00000556041 767 ntBASIC17.62■□□□□ 0.41
MBD4O95243 AC008805.1-201ENST00000590892 364 ntBASIC17.62■□□□□ 0.41
MBD4O95243 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.62■□□□□ 0.41
MBD4O95243 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.62■□□□□ 0.41
MBD4O95243 AC244452.3-201ENST00000636814 210 ntBASIC17.62■□□□□ 0.41
MBD4O95243 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD4O95243 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
MBD4O95243 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
MBD4O95243 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD4O95243 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD4O95243 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.62■□□□□ 0.41
MBD4O95243 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.62■□□□□ 0.41
MBD4O95243 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
MBD4O95243 TMBIM7P-202ENST00000641474 1516 ntBASIC17.62■□□□□ 0.41
MBD4O95243 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MBD4O95243 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.61■□□□□ 0.41
MBD4O95243 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MBD4O95243 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
MBD4O95243 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.61■□□□□ 0.41
MBD4O95243 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
MBD4O95243 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 FNTAP2-201ENST00000430308 634 ntBASIC17.61■□□□□ 0.41
MBD4O95243 BX284668.4-201ENST00000453917 508 ntBASIC17.61■□□□□ 0.41
MBD4O95243 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.61■□□□□ 0.41
MBD4O95243 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.61■□□□□ 0.41
MBD4O95243 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.61■□□□□ 0.41
MBD4O95243 AC106794.1-201ENST00000506935 792 ntBASIC17.61■□□□□ 0.41
MBD4O95243 SCARNA21-201ENST00000517026 139 ntBASIC17.61■□□□□ 0.41
MBD4O95243 AC013355.1-201ENST00000562625 723 ntBASIC17.61■□□□□ 0.41
MBD4O95243 RN7SL163P-201ENST00000583100 276 ntBASIC17.61■□□□□ 0.41
MBD4O95243 AC103810.3-201ENST00000583567 96 ntBASIC17.61■□□□□ 0.41
MBD4O95243 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 AC136759.1-202ENST00000530858 2194 ntBASIC17.61■□□□□ 0.41
MBD4O95243 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.61■□□□□ 0.41
MBD4O95243 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
MBD4O95243 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.61■□□□□ 0.41
MBD4O95243 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.61■□□□□ 0.41
MBD4O95243 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MBD4O95243 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.6■□□□□ 0.41
MBD4O95243 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD4O95243 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD4O95243 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.6■□□□□ 0.41
MBD4O95243 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MBD4O95243 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD4O95243 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MBD4O95243 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD4O95243 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MBD4O95243 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MBD4O95243 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.6■□□□□ 0.41
MBD4O95243 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MBD4O95243 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MBD4O95243 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.6■□□□□ 0.41
MBD4O95243 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms