Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
CDRT1O95170 AC004945.1-201ENST00000416738 983 ntBASIC13.32□□□□□ -0.28
CDRT1O95170 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 RBPMS2P1-201ENST00000437762 623 ntBASIC13.32□□□□□ -0.28
CDRT1O95170 MTND6P24-201ENST00000440466 518 ntBASIC13.32□□□□□ -0.28
CDRT1O95170 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.32□□□□□ -0.28
CDRT1O95170 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.32□□□□□ -0.28
CDRT1O95170 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.32□□□□□ -0.28
CDRT1O95170 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.32□□□□□ -0.28
CDRT1O95170 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 AC005829.1-201ENST00000570002 483 ntBASIC13.32□□□□□ -0.28
CDRT1O95170 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.32□□□□□ -0.28
CDRT1O95170 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.32□□□□□ -0.28
CDRT1O95170 RN7SL828P-201ENST00000607615 303 ntBASIC13.32□□□□□ -0.28
CDRT1O95170 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.32□□□□□ -0.28
CDRT1O95170 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.32□□□□□ -0.28
CDRT1O95170 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDRT1O95170 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.32□□□□□ -0.28
CDRT1O95170 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDRT1O95170 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDRT1O95170 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.31□□□□□ -0.28
CDRT1O95170 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 AC068760.1-201ENST00000493579 1953 ntBASIC13.31□□□□□ -0.28
CDRT1O95170 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.31□□□□□ -0.28
CDRT1O95170 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.31□□□□□ -0.28
CDRT1O95170 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 AL133267.1-201ENST00000398220 340 ntBASIC13.31□□□□□ -0.28
CDRT1O95170 SPDYE17-201ENST00000412399 783 ntBASIC13.31□□□□□ -0.28
CDRT1O95170 AC004461.1-201ENST00000412461 403 ntBASIC13.31□□□□□ -0.28
CDRT1O95170 AL627223.1-201ENST00000416693 442 ntBASIC13.31□□□□□ -0.28
CDRT1O95170 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.31□□□□□ -0.28
CDRT1O95170 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.31□□□□□ -0.28
CDRT1O95170 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CDRT1O95170 AC093520.2-201ENST00000561830 333 ntBASIC13.31□□□□□ -0.28
CDRT1O95170 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CDRT1O95170 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 AL133215.2-201ENST00000609242 977 ntBASIC13.31□□□□□ -0.28
CDRT1O95170 AL513210.1-201ENST00000629608 234 ntBASIC13.31□□□□□ -0.28
CDRT1O95170 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.31□□□□□ -0.28
CDRT1O95170 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CDRT1O95170 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDRT1O95170 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDRT1O95170 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CDRT1O95170 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDRT1O95170 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CDRT1O95170 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.3□□□□□ -0.28
CDRT1O95170 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDRT1O95170 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms