Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 GUSBP10-201ENST00000417412 665 ntBASIC13.29□□□□□ -0.28
CEACAM4O75871 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.29□□□□□ -0.28
CEACAM4O75871 KRT18P66-201ENST00000452970 1269 ntBASIC13.29□□□□□ -0.28
CEACAM4O75871 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.29□□□□□ -0.28
CEACAM4O75871 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.29□□□□□ -0.28
CEACAM4O75871 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 AC138701.2-201ENST00000553634 226 ntBASIC13.29□□□□□ -0.28
CEACAM4O75871 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.29□□□□□ -0.28
CEACAM4O75871 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM4O75871 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.29□□□□□ -0.28
CEACAM4O75871 AC090386.2-201ENST00000623010 1039 ntBASIC13.29□□□□□ -0.28
CEACAM4O75871 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.29□□□□□ -0.28
CEACAM4O75871 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM4O75871 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM4O75871 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CEACAM4O75871 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CEACAM4O75871 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.29□□□□□ -0.28
CEACAM4O75871 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CEACAM4O75871 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.28□□□□□ -0.28
CEACAM4O75871 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CEACAM4O75871 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CEACAM4O75871 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CEACAM4O75871 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 BAK1P1-201ENST00000317045 636 ntBASIC13.28□□□□□ -0.28
CEACAM4O75871 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CEACAM4O75871 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.28□□□□□ -0.28
CEACAM4O75871 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.28□□□□□ -0.28
CEACAM4O75871 AC092580.1-201ENST00000433998 658 ntBASIC13.28□□□□□ -0.28
CEACAM4O75871 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC13.28□□□□□ -0.28
CEACAM4O75871 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.28□□□□□ -0.28
CEACAM4O75871 RN7SL277P-201ENST00000481521 288 ntBASIC13.28□□□□□ -0.28
CEACAM4O75871 AL157792.1-201ENST00000488281 530 ntBASIC13.28□□□□□ -0.28
CEACAM4O75871 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CEACAM4O75871 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.28□□□□□ -0.28
CEACAM4O75871 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 MIR3180-2-201ENST00000581748 88 ntBASIC13.28□□□□□ -0.28
CEACAM4O75871 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.28□□□□□ -0.28
CEACAM4O75871 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
CEACAM4O75871 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.28□□□□□ -0.28
CEACAM4O75871 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CEACAM4O75871 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.28□□□□□ -0.28
CEACAM4O75871 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.28□□□□□ -0.28
CEACAM4O75871 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.28□□□□□ -0.28
CEACAM4O75871 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CEACAM4O75871 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.28□□□□□ -0.28
CEACAM4O75871 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.27□□□□□ -0.28
CEACAM4O75871 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.27□□□□□ -0.28
CEACAM4O75871 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM4O75871 CICP23-201ENST00000605013 2741 ntBASIC13.27□□□□□ -0.28
CEACAM4O75871 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.27□□□□□ -0.28
CEACAM4O75871 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM4O75871 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM4O75871 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM4O75871 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CEACAM4O75871 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
CEACAM4O75871 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.27□□□□□ -0.28
CEACAM4O75871 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM4O75871 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.27□□□□□ -0.28
CEACAM4O75871 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CEACAM4O75871 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CEACAM4O75871 AC006504.5-208ENST00000588784 2401 ntBASIC13.27□□□□□ -0.29
CEACAM4O75871 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM4O75871 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CEACAM4O75871 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM4O75871 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CEACAM4O75871 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.27□□□□□ -0.29
CEACAM4O75871 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CEACAM4O75871 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms