Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
EXTL3O43909 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
EXTL3O43909 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.06■□□□□ 0.16
EXTL3O43909 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.06■□□□□ 0.16
EXTL3O43909 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 MYADML-201ENST00000474610 2147 ntBASIC16.06■□□□□ 0.16
EXTL3O43909 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.06■□□□□ 0.16
EXTL3O43909 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 KHSRPP1-201ENST00000427983 1768 ntBASIC16.06■□□□□ 0.16
EXTL3O43909 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 AC020907.1-201ENST00000616460 1350 ntBASIC16.06■□□□□ 0.16
EXTL3O43909 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 BCYRN1-201ENST00000418539 200 ntBASIC16.06■□□□□ 0.16
EXTL3O43909 MTX1P1-201ENST00000440904 838 ntBASIC16.06■□□□□ 0.16
EXTL3O43909 RPSAP36-202ENST00000494591 1261 ntBASIC16.06■□□□□ 0.16
EXTL3O43909 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
EXTL3O43909 FAM86HP-204ENST00000513466 959 ntBASIC16.06■□□□□ 0.16
EXTL3O43909 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 DUX4L46-201ENST00000566845 751 ntBASIC16.06■□□□□ 0.16
EXTL3O43909 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.06■□□□□ 0.16
EXTL3O43909 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.06■□□□□ 0.16
EXTL3O43909 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.06■□□□□ 0.16
EXTL3O43909 AC009955.4-201ENST00000597192 544 ntBASIC16.06■□□□□ 0.16
EXTL3O43909 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
EXTL3O43909 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
EXTL3O43909 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
EXTL3O43909 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 AP001267.2-201ENST00000532619 2086 ntBASIC16.06■□□□□ 0.16
EXTL3O43909 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
EXTL3O43909 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
EXTL3O43909 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
EXTL3O43909 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
EXTL3O43909 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
EXTL3O43909 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 AC006504.5-208ENST00000588784 2401 ntBASIC16.05■□□□□ 0.16
EXTL3O43909 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 E2F3P2-201ENST00000447755 1422 ntBASIC16.05■□□□□ 0.16
EXTL3O43909 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.05■□□□□ 0.16
EXTL3O43909 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
EXTL3O43909 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
EXTL3O43909 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.05■□□□□ 0.16
EXTL3O43909 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.05■□□□□ 0.16
EXTL3O43909 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.05■□□□□ 0.16
EXTL3O43909 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 GOLGA2P4-201ENST00000441462 777 ntBASIC16.05■□□□□ 0.16
EXTL3O43909 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 AC108725.1-201ENST00000495472 409 ntBASIC16.05■□□□□ 0.16
EXTL3O43909 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.05■□□□□ 0.16
EXTL3O43909 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
EXTL3O43909 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.05■□□□□ 0.16
EXTL3O43909 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.05■□□□□ 0.16
EXTL3O43909 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.05■□□□□ 0.16
EXTL3O43909 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.05■□□□□ 0.16
EXTL3O43909 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
EXTL3O43909 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.05■□□□□ 0.16
EXTL3O43909 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
EXTL3O43909 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.05■□□□□ 0.16
EXTL3O43909 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EXTL3O43909 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.04■□□□□ 0.16
EXTL3O43909 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
EXTL3O43909 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.04■□□□□ 0.16
EXTL3O43909 KRT8P28-201ENST00000433288 1390 ntBASIC16.04■□□□□ 0.16
EXTL3O43909 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EXTL3O43909 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.04■□□□□ 0.16
EXTL3O43909 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms