Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SLC28A2O43868 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 AL121723.1-201ENST00000445194 1519 ntBASIC14.41□□□□□ -0.1
SLC28A2O43868 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A2O43868 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A2O43868 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 AP000845.1-201ENST00000581677 2131 ntBASIC14.41□□□□□ -0.1
SLC28A2O43868 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SLC28A2O43868 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC28A2O43868 MTX1P1-201ENST00000440904 838 ntBASIC14.41□□□□□ -0.1
SLC28A2O43868 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A2O43868 AC114501.1-201ENST00000445949 172 ntBASIC14.41□□□□□ -0.1
SLC28A2O43868 AL133466.1-201ENST00000447582 150 ntBASIC14.41□□□□□ -0.1
SLC28A2O43868 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A2O43868 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC28A2O43868 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC28A2O43868 CHMP4BP1-201ENST00000556017 588 ntBASIC14.41□□□□□ -0.1
SLC28A2O43868 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC28A2O43868 MIR3619-201ENST00000579667 83 ntBASIC14.41□□□□□ -0.1
SLC28A2O43868 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC28A2O43868 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.41□□□□□ -0.1
SLC28A2O43868 AC091812.3-201ENST00000621362 345 ntBASIC14.41□□□□□ -0.1
SLC28A2O43868 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A2O43868 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SLC28A2O43868 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.41□□□□□ -0.1
SLC28A2O43868 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.41□□□□□ -0.1
SLC28A2O43868 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 AL390755.1-201ENST00000623716 2027 ntBASIC14.41□□□□□ -0.1
SLC28A2O43868 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SLC28A2O43868 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SLC28A2O43868 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SLC28A2O43868 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 REXO1L2P-201ENST00000425429 2069 ntBASIC14.4□□□□□ -0.1
SLC28A2O43868 AC232323.1-201ENST00000540724 2099 ntBASIC14.4□□□□□ -0.1
SLC28A2O43868 REXO1L5P-201ENST00000622260 2098 ntBASIC14.4□□□□□ -0.1
SLC28A2O43868 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SLC28A2O43868 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SLC28A2O43868 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SLC28A2O43868 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC28A2O43868 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SLC28A2O43868 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.4□□□□□ -0.1
SLC28A2O43868 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 RN7SL720P-201ENST00000488178 304 ntBASIC14.4□□□□□ -0.1
SLC28A2O43868 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SLC28A2O43868 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SLC28A2O43868 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.4□□□□□ -0.1
SLC28A2O43868 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.4□□□□□ -0.1
SLC28A2O43868 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SLC28A2O43868 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms