Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 BCRP6-201ENST00000510112 632 ntBASIC12.95□□□□□ -0.34
PHF1O43189 BCRP7-201ENST00000511549 544 ntBASIC12.95□□□□□ -0.34
PHF1O43189 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.95□□□□□ -0.34
PHF1O43189 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.95□□□□□ -0.34
PHF1O43189 MIR5189-201ENST00000577370 114 ntBASIC12.95□□□□□ -0.34
PHF1O43189 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 BRI3BPP1-201ENST00000594224 787 ntBASIC12.95□□□□□ -0.34
PHF1O43189 AL021578.1-201ENST00000613646 709 ntBASIC12.95□□□□□ -0.34
PHF1O43189 CU634019.7-201ENST00000624153 1185 ntBASIC12.95□□□□□ -0.34
PHF1O43189 FP236241.2-201ENST00000624906 1185 ntBASIC12.95□□□□□ -0.34
PHF1O43189 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.95□□□□□ -0.34
PHF1O43189 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
PHF1O43189 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.95□□□□□ -0.34
PHF1O43189 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.95□□□□□ -0.34
PHF1O43189 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.95□□□□□ -0.34
PHF1O43189 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
PHF1O43189 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
PHF1O43189 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 KRT8P22-201ENST00000562317 1415 ntBASIC12.95□□□□□ -0.34
PHF1O43189 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
PHF1O43189 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 INTS4P2-202ENST00000614726 2019 ntBASIC12.95□□□□□ -0.34
PHF1O43189 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PHF1O43189 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PHF1O43189 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
PHF1O43189 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.94□□□□□ -0.34
PHF1O43189 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
PHF1O43189 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.94□□□□□ -0.34
PHF1O43189 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 AGER-203ENST00000375065 665 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.94□□□□□ -0.34
PHF1O43189 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.94□□□□□ -0.34
PHF1O43189 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.94□□□□□ -0.34
PHF1O43189 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.94□□□□□ -0.34
PHF1O43189 RPL13AP25-201ENST00000484130 612 ntBASIC12.94□□□□□ -0.34
PHF1O43189 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.94□□□□□ -0.34
PHF1O43189 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.94□□□□□ -0.34
PHF1O43189 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.94□□□□□ -0.34
PHF1O43189 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.94□□□□□ -0.34
PHF1O43189 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.94□□□□□ -0.34
PHF1O43189 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.94□□□□□ -0.34
PHF1O43189 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.94□□□□□ -0.34
PHF1O43189 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.94□□□□□ -0.34
PHF1O43189 AC091271.1-201ENST00000611877 1162 ntBASIC12.94□□□□□ -0.34
PHF1O43189 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.94□□□□□ -0.34
PHF1O43189 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.94□□□□□ -0.34
PHF1O43189 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
PHF1O43189 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PHF1O43189 LINC01230-201ENST00000625222 3017 ntBASIC12.94□□□□□ -0.34
PHF1O43189 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms