Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.52□□□□□ -0.09
E2F3O00716 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
E2F3O00716 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.52□□□□□ -0.09
E2F3O00716 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
E2F3O00716 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 AL138725.1-201ENST00000407347 1314 ntBASIC14.51□□□□□ -0.09
E2F3O00716 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
E2F3O00716 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
E2F3O00716 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.51□□□□□ -0.09
E2F3O00716 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
E2F3O00716 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.51□□□□□ -0.09
E2F3O00716 FO681548.1-201ENST00000455617 1132 ntBASIC14.51□□□□□ -0.09
E2F3O00716 CROCCP4-201ENST00000457096 498 ntBASIC14.51□□□□□ -0.09
E2F3O00716 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 AC093433.1-201ENST00000458048 571 ntBASIC14.51□□□□□ -0.09
E2F3O00716 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.51□□□□□ -0.09
E2F3O00716 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.51□□□□□ -0.09
E2F3O00716 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.51□□□□□ -0.09
E2F3O00716 AC015936.2-201ENST00000593177 259 ntBASIC14.51□□□□□ -0.09
E2F3O00716 AL606495.2-201ENST00000605867 535 ntBASIC14.51□□□□□ -0.09
E2F3O00716 AC133552.6-201ENST00000613406 534 ntBASIC14.51□□□□□ -0.09
E2F3O00716 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
E2F3O00716 RPSAP52-203ENST00000622976 1023 ntBASIC14.51□□□□□ -0.09
E2F3O00716 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.51□□□□□ -0.09
E2F3O00716 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.51□□□□□ -0.09
E2F3O00716 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.51□□□□□ -0.09
E2F3O00716 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
E2F3O00716 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
E2F3O00716 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 MYADML-201ENST00000474610 2147 ntBASIC14.5□□□□□ -0.09
E2F3O00716 MSTO2P-201ENST00000314835 1709 ntBASIC14.5□□□□□ -0.09
E2F3O00716 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 AC005840.4-201ENST00000541242 2494 ntBASIC14.5□□□□□ -0.09
E2F3O00716 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
E2F3O00716 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
E2F3O00716 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
E2F3O00716 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
E2F3O00716 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.5□□□□□ -0.09
E2F3O00716 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.5□□□□□ -0.09
E2F3O00716 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.5□□□□□ -0.09
E2F3O00716 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
E2F3O00716 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
E2F3O00716 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
E2F3O00716 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.5□□□□□ -0.09
E2F3O00716 AL033527.5-201ENST00000641382 801 ntBASIC14.5□□□□□ -0.09
E2F3O00716 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.5□□□□□ -0.09
E2F3O00716 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
E2F3O00716 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.5□□□□□ -0.09
E2F3O00716 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.5□□□□□ -0.09
E2F3O00716 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
E2F3O00716 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.5□□□□□ -0.09
E2F3O00716 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
E2F3O00716 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms