Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.95□□□□□ -0.5
UPK2O00526 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.95□□□□□ -0.5
UPK2O00526 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.95□□□□□ -0.5
UPK2O00526 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.95□□□□□ -0.5
UPK2O00526 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
UPK2O00526 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
UPK2O00526 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
UPK2O00526 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.95□□□□□ -0.5
UPK2O00526 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
UPK2O00526 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
UPK2O00526 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
UPK2O00526 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.95□□□□□ -0.5
UPK2O00526 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 INE2-201ENST00000630399 1874 ntBASIC11.95□□□□□ -0.5
UPK2O00526 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.95□□□□□ -0.5
UPK2O00526 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.95□□□□□ -0.5
UPK2O00526 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.95□□□□□ -0.5
UPK2O00526 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 AC007541.1-201ENST00000570282 1469 ntBASIC11.95□□□□□ -0.5
UPK2O00526 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
UPK2O00526 RN7SL832P-201ENST00000607781 1756 ntBASIC11.95□□□□□ -0.5
UPK2O00526 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
UPK2O00526 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
UPK2O00526 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 AL138725.1-201ENST00000407347 1314 ntBASIC11.94□□□□□ -0.5
UPK2O00526 KRT8P35-201ENST00000483942 1338 ntBASIC11.94□□□□□ -0.5
UPK2O00526 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
UPK2O00526 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
UPK2O00526 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.94□□□□□ -0.5
UPK2O00526 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 UGT1A2P-201ENST00000454886 866 ntBASIC11.94□□□□□ -0.5
UPK2O00526 FO681548.1-201ENST00000455617 1132 ntBASIC11.94□□□□□ -0.5
UPK2O00526 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.94□□□□□ -0.5
UPK2O00526 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.94□□□□□ -0.5
UPK2O00526 AC131206.1-201ENST00000538078 1211 ntBASIC11.94□□□□□ -0.5
UPK2O00526 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.94□□□□□ -0.5
UPK2O00526 AP001063.1-201ENST00000568332 529 ntBASIC11.94□□□□□ -0.5
UPK2O00526 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
UPK2O00526 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
UPK2O00526 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC11.94□□□□□ -0.5
UPK2O00526 MIR6074-201ENST00000612054 107 ntBASIC11.94□□□□□ -0.5
UPK2O00526 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.94□□□□□ -0.5
UPK2O00526 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 AC011840.2-201ENST00000563063 1520 ntBASIC11.94□□□□□ -0.5
UPK2O00526 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 MST1P2-201ENST00000457982 2291 ntBASIC11.94□□□□□ -0.5
UPK2O00526 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
UPK2O00526 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
UPK2O00526 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 AC016397.2-201ENST00000624848 1985 ntBASIC11.94□□□□□ -0.5
UPK2O00526 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
UPK2O00526 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
UPK2O00526 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms