Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TERF1P3-201ENST00000505638 1227 ntBASIC11.98□□□□□ -0.49
SRRM4A7MD48 AC131206.1-201ENST00000538078 1211 ntBASIC11.98□□□□□ -0.49
SRRM4A7MD48 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM4A7MD48 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 AC145423.3-201ENST00000615987 467 ntBASIC11.98□□□□□ -0.49
SRRM4A7MD48 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM4A7MD48 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM4A7MD48 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM4A7MD48 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 MYADML-201ENST00000474610 2147 ntBASIC11.98□□□□□ -0.49
SRRM4A7MD48 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM4A7MD48 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SRRM4A7MD48 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
SRRM4A7MD48 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 AC020910.5-201ENST00000623668 1865 ntBASIC11.97□□□□□ -0.49
SRRM4A7MD48 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 MRPL37P1-201ENST00000592451 1337 ntBASIC11.97□□□□□ -0.49
SRRM4A7MD48 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 POM121L8P-201ENST00000417732 1281 ntBASIC11.97□□□□□ -0.49
SRRM4A7MD48 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 ACTG1P3-201ENST00000431775 1114 ntBASIC11.97□□□□□ -0.49
SRRM4A7MD48 POM121L9P-203ENST00000441984 1285 ntBASIC11.97□□□□□ -0.49
SRRM4A7MD48 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 AC012441.1-201ENST00000446669 685 ntBASIC11.97□□□□□ -0.49
SRRM4A7MD48 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.97□□□□□ -0.49
SRRM4A7MD48 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SRRM4A7MD48 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SRRM4A7MD48 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 AC011840.2-201ENST00000563063 1520 ntBASIC11.96□□□□□ -0.49
SRRM4A7MD48 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SRRM4A7MD48 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms