Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNPO3Q9Y5L0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNPO3Q9Y5L0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNPO3Q9Y5L0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNPO3Q9Y5L0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.53□□□□□ -0.08
TNPO3Q9Y5L0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.53□□□□□ -0.08
TNPO3Q9Y5L0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNPO3Q9Y5L0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TNPO3Q9Y5L0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNPO3Q9Y5L0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 LINC01230-201ENST00000625222 3017 ntBASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TNPO3Q9Y5L0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 AC245100.3-201ENST00000441281 285 ntBASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 AL033527.5-201ENST00000641382 801 ntBASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNPO3Q9Y5L0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 AC006504.5-208ENST00000588784 2401 ntBASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 AC090505.1-201ENST00000430515 1834 ntBASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 RN7SL204P-201ENST00000582831 262 ntBASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 AC138761.1-201ENST00000584393 385 ntBASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 AC117489.1-201ENST00000625169 3217 ntBASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TNPO3Q9Y5L0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms