Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC88CQ9P219 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 RPSAP36-202ENST00000494591 1261 ntBASIC14.18□□□□□ -0.14
CCDC88CQ9P219 AC044849.1-201ENST00000519737 1188 ntBASIC14.18□□□□□ -0.14
CCDC88CQ9P219 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 MIR4741-201ENST00000579822 90 ntBASIC14.18□□□□□ -0.14
CCDC88CQ9P219 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 AC012508.2-201ENST00000567613 1472 ntBASIC14.18□□□□□ -0.14
CCDC88CQ9P219 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC88CQ9P219 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 TPM3P8-201ENST00000330554 643 ntBASIC14.17□□□□□ -0.14
CCDC88CQ9P219 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AL591846.1-201ENST00000451736 433 ntBASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 FKBP4P6-201ENST00000457486 1332 ntBASIC14.17□□□□□ -0.14
CCDC88CQ9P219 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC88CQ9P219 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms