Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 INE1-201ENST00000456273 945 ntBASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 SAMD11P1-201ENST00000571429 661 ntBASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 AC074044.1-201ENST00000609673 707 ntBASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 AC020910.6-201ENST00000623084 1459 ntBASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 AL591122.2-201ENST00000624125 1853 ntBASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCM2LQ9NUG4 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 MIR1909-201ENST00000411312 80 ntBASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 KRT18P64-201ENST00000434946 1219 ntBASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 API5-211ENST00000534695 560 ntTSL 5 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 AC007967.4-201ENST00000614700 386 ntBASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 AC023794.5-201ENST00000564380 2157 ntBASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.21□□□□□ -0.13
CCM2LQ9NUG4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCM2LQ9NUG4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CCM2LQ9NUG4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms