Protein–RNA interactions for Protein: Q9NP64

ZCCHC17, Nucleolar protein of 40 kDa, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17Q9NP64 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.38■□□□□ 0.37
ZCCHC17Q9NP64 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.38■□□□□ 0.37
ZCCHC17Q9NP64 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZCCHC17Q9NP64 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZCCHC17Q9NP64 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZCCHC17Q9NP64 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ZCCHC17Q9NP64 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZCCHC17Q9NP64 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.38■□□□□ 0.37
ZCCHC17Q9NP64 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ZCCHC17Q9NP64 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 RPL7P35-201ENST00000446943 740 ntBASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 AC007686.3-201ENST00000619017 3487 ntBASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.37■□□□□ 0.37
ZCCHC17Q9NP64 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 AC005089.1-201ENST00000619486 2241 ntBASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 SSR4P1-203ENST00000599569 2260 ntBASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 AC136621.1-201ENST00000624017 2304 ntBASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 AL627231.1-201ENST00000394467 1125 ntBASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 FAM90A7P-201ENST00000382628 1395 ntBASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 FAM90A23P-201ENST00000400136 1395 ntBASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 E2F3P2-201ENST00000447755 1422 ntBASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ZCCHC17Q9NP64 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.35■□□□□ 0.37
ZCCHC17Q9NP64 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZCCHC17Q9NP64 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
ZCCHC17Q9NP64 AC112504.1-201ENST00000623415 1841 ntBASIC17.35■□□□□ 0.37
ZCCHC17Q9NP64 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZCCHC17Q9NP64 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ZCCHC17Q9NP64 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.35■□□□□ 0.37
ZCCHC17Q9NP64 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms