Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP13A1Q9HD20 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.22■□□□□ 0.03
ATP13A1Q9HD20 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP13A1Q9HD20 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP13A1Q9HD20 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ATP13A1Q9HD20 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP13A1Q9HD20 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATP13A1Q9HD20 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 MIR326-201ENST00000362220 95 ntBASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 GCOM2-201ENST00000509133 1104 ntBASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 RN7SL219P-201ENST00000582872 296 ntBASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 AL358472.3-201ENST00000608147 415 ntBASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 AL136301.1-201ENST00000615830 422 ntBASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 AC244157.2-201ENST00000616239 1006 ntBASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 OR2I1P-210ENST00000642037 4691 ntBASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 AC015818.8-201ENST00000587907 1519 ntBASIC15.21■□□□□ 0.03
ATP13A1Q9HD20 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATP13A1Q9HD20 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ATP13A1Q9HD20 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
ATP13A1Q9HD20 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATP13A1Q9HD20 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATP13A1Q9HD20 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATP13A1Q9HD20 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 BTBD6P1-201ENST00000412176 1267 ntBASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 AP001002.3-201ENST00000623482 206 ntBASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.2■□□□□ 0.02
ATP13A1Q9HD20 AL136172.1-201ENST00000598590 1394 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms