Protein–RNA interactions for Protein: Q9HCM2

PLXNA4, Plexin-A4, humanhuman

Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4Q9HCM2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AC095040.1-201ENST00000513286 675 ntBASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 KLF17P1-201ENST00000547105 1126 ntBASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AC068867.1-201ENST00000559855 150 ntBASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 SIGLEC22P-201ENST00000599104 714 ntBASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AL133467.4-201ENST00000602953 725 ntBASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AL591471.1-201ENST00000621855 229 ntBASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PLXNA4Q9HCM2 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 AL132994.1-201ENST00000554098 400 ntBASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 DNM1P51-201ENST00000558149 522 ntBASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 AL118516.1-201ENST00000564152 670 ntBASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 TNRC18P2-201ENST00000417666 2714 ntBASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PLXNA4Q9HCM2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 KRT17P4-201ENST00000429445 819 ntBASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 AC140113.1-201ENST00000603467 169 ntBASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 AL118522.1-201ENST00000611368 560 ntBASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PLXNA4Q9HCM2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms