Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 AC104640.1-201ENST00000562617 2109 ntBASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CNTNAP3Q9BZ76 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CNTNAP3Q9BZ76 KRT18P9-201ENST00000604826 1300 ntBASIC14.15□□□□□ -0.15
CNTNAP3Q9BZ76 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 MBLAC2-202ENST00000514906 1936 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 PTGER4P2-201ENST00000328411 252 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 AL139094.1-201ENST00000405549 1188 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 ACTG1P19-201ENST00000418987 1116 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 DUTP3-201ENST00000450025 415 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 PTGER4P3-201ENST00000458150 252 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 MIR4640-201ENST00000581824 90 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 AC090510.3-201ENST00000615831 821 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 E2F3P2-201ENST00000447755 1422 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 AC015909.3-201ENST00000572855 1794 ntBASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.14□□□□□ -0.15
CNTNAP3Q9BZ76 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 AL672207.1-201ENST00000328462 1570 ntBASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.13□□□□□ -0.15
CNTNAP3Q9BZ76 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms