Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC100827.2-201ENST00000563214 1194 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 RN7SL602P-201ENST00000578326 324 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC008805.1-201ENST00000590892 364 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 NDUFV2P1-201ENST00000596415 907 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 BNIP3P13-201ENST00000599968 566 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AP001505.2-201ENST00000616815 443 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC068587.8-201ENST00000641239 219 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC138028.6-201ENST00000616106 1482 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 CYP4F23P-201ENST00000593402 1579 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 KRT8P29-201ENST00000420409 1371 ntBASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
KRTAP4-3Q9BYR4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ZBED1P1-201ENST00000502364 1930 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC023157.3-201ENST00000619086 2088 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 LINC01101-201ENST00000622953 1884 ntBASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 STX3-207ENST00000633708 3111 ntTSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
KRTAP4-3Q9BYR4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms