Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 DNAJB5-210ENST00000545841 3068 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 TNRC18P1-201ENST00000502875 3650 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC073621.1-201ENST00000392730 636 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 HIST2H3DP1-201ENST00000401004 416 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AL596275.1-201ENST00000423464 877 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 KRT18P27-201ENST00000427733 1299 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 FGFR3P6-201ENST00000457012 610 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 NMU-203ENST00000507338 658 ntTSL 3 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC022447.6-201ENST00000515522 438 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 OR7E14P-202ENST00000530490 1290 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CD63-210ENST00000550776 870 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 CD7-202ENST00000578509 925 ntTSL 3 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC097359.3-201ENST00000603982 1210 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC025062.2-201ENST00000605477 670 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AC026790.2-201ENST00000606282 430 ntBASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC4.04□□□□□ -1.76
LCE3DQ9BYE3 AP000240.1-201ENST00000609910 452 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms