Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 AC126335.2-201ENST00000623362 4637 ntBASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 BTBD7P1-201ENST00000447253 1453 ntBASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 AL645937.2-201ENST00000396808 931 ntBASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 AL691403.2-201ENST00000618460 490 ntBASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HDHD3Q9BSH5 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 AC026434.2-201ENST00000506094 1078 ntBASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 AC023310.3-201ENST00000557027 670 ntBASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 AC100756.1-201ENST00000562736 682 ntBASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 RARRES2P5-201ENST00000564013 466 ntBASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 AC138749.3-201ENST00000567691 622 ntBASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 AC116165.1-201ENST00000611806 668 ntBASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.59□□□□□ -0.39
HDHD3Q9BSH5 INE2-201ENST00000630399 1874 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms