Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 FO538757.1-201ENST00000623083 1397 ntBASIC17.09■□□□□ 0.33
ARID3AQ99856 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.09■□□□□ 0.33
ARID3AQ99856 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC17.09■□□□□ 0.33
ARID3AQ99856 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.09■□□□□ 0.33
ARID3AQ99856 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.09■□□□□ 0.33
ARID3AQ99856 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ARID3AQ99856 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.09■□□□□ 0.33
ARID3AQ99856 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC17.09■□□□□ 0.33
ARID3AQ99856 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARID3AQ99856 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ARID3AQ99856 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ARID3AQ99856 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ARID3AQ99856 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17.08■□□□□ 0.33
ARID3AQ99856 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
ARID3AQ99856 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC17.08■□□□□ 0.33
ARID3AQ99856 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARID3AQ99856 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARID3AQ99856 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARID3AQ99856 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.08■□□□□ 0.33
ARID3AQ99856 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARID3AQ99856 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARID3AQ99856 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARID3AQ99856 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ARID3AQ99856 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.08■□□□□ 0.32
ARID3AQ99856 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.08■□□□□ 0.32
ARID3AQ99856 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.08■□□□□ 0.32
ARID3AQ99856 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ARID3AQ99856 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ARID3AQ99856 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 AC069120.2-201ENST00000524091 540 ntBASIC17.08■□□□□ 0.32
ARID3AQ99856 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.08■□□□□ 0.32
ARID3AQ99856 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.08■□□□□ 0.32
ARID3AQ99856 AL450472.2-201ENST00000603663 1156 ntBASIC17.08■□□□□ 0.32
ARID3AQ99856 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ARID3AQ99856 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC17.08■□□□□ 0.32
ARID3AQ99856 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC17.08■□□□□ 0.32
ARID3AQ99856 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ARID3AQ99856 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC17.08■□□□□ 0.32
ARID3AQ99856 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARID3AQ99856 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ARID3AQ99856 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.08■□□□□ 0.32
ARID3AQ99856 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17.07■□□□□ 0.32
ARID3AQ99856 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.07■□□□□ 0.32
ARID3AQ99856 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 MIR943-201ENST00000401286 94 ntBASIC17.07■□□□□ 0.32
ARID3AQ99856 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.07■□□□□ 0.32
ARID3AQ99856 PHKG1P2-201ENST00000457537 863 ntBASIC17.07■□□□□ 0.32
ARID3AQ99856 HLA-V-204ENST00000476601 1289 ntBASIC17.07■□□□□ 0.32
ARID3AQ99856 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.07■□□□□ 0.32
ARID3AQ99856 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.07■□□□□ 0.32
ARID3AQ99856 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.07■□□□□ 0.32
ARID3AQ99856 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 AC073592.8-201ENST00000624126 511 ntBASIC17.07■□□□□ 0.32
ARID3AQ99856 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.07■□□□□ 0.32
ARID3AQ99856 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARID3AQ99856 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC17.07■□□□□ 0.32
ARID3AQ99856 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC17.07■□□□□ 0.32
ARID3AQ99856 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARID3AQ99856 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms