Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 Z97205.2-201ENST00000564697 1639 ntBASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLPTM1LQ96KA5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 AC015922.1-201ENST00000421102 1152 ntBASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 KRT18P43-201ENST00000469825 1281 ntBASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 MYADML-201ENST00000474610 2147 ntBASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 AC069335.1-201ENST00000489972 472 ntBASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 AC093909.1-201ENST00000504731 1122 ntBASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 AC026120.1-201ENST00000611536 926 ntBASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CLPTM1LQ96KA5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 MRPL3P1-201ENST00000400109 1033 ntBASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 HLA-K-203ENST00000430151 1046 ntBASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 LINC01115-203ENST00000606068 577 ntBASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 AC084121.4-201ENST00000641598 221 ntBASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 AF228730.8-201ENST00000642140 221 ntBASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CLPTM1LQ96KA5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms