Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 AL157791.1-201ENST00000553667 1699 ntBASIC16.08■□□□□ 0.16
PGBD4Q96DM1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PGBD4Q96DM1 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PGBD4Q96DM1 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PGBD4Q96DM1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PGBD4Q96DM1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.08■□□□□ 0.16
PGBD4Q96DM1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PGBD4Q96DM1 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 LINC02228-204ENST00000642115 2962 ntBASIC16.07■□□□□ 0.16
PGBD4Q96DM1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 AC092506.1-202ENST00000401022 528 ntBASIC16.07■□□□□ 0.16
PGBD4Q96DM1 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 CICP12-201ENST00000455801 843 ntBASIC16.07■□□□□ 0.16
PGBD4Q96DM1 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 AL132994.2-201ENST00000603120 687 ntBASIC16.07■□□□□ 0.16
PGBD4Q96DM1 MIR6720-201ENST00000611664 98 ntBASIC16.07■□□□□ 0.16
PGBD4Q96DM1 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PGBD4Q96DM1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.06■□□□□ 0.16
PGBD4Q96DM1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 RN7SKP214-201ENST00000364208 315 ntBASIC16.06■□□□□ 0.16
PGBD4Q96DM1 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 RN7SL720P-201ENST00000488178 304 ntBASIC16.06■□□□□ 0.16
PGBD4Q96DM1 HLA-J-204ENST00000495278 958 ntBASIC16.06■□□□□ 0.16
PGBD4Q96DM1 RNA5SP423-201ENST00000517127 109 ntBASIC16.06■□□□□ 0.16
PGBD4Q96DM1 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 AL161670.2-201ENST00000557650 1227 ntBASIC16.06■□□□□ 0.16
PGBD4Q96DM1 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 TNRC18P2-201ENST00000417666 2714 ntBASIC16.06■□□□□ 0.16
PGBD4Q96DM1 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PGBD4Q96DM1 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PGBD4Q96DM1 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms