Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LMO3Q8TAP4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AC005034.1-201ENST00000426657 489 ntBASIC15.81■□□□□ 0.12
LMO3Q8TAP4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 ACA64.2-201ENST00000459014 129 ntBASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 RAB43P1-201ENST00000561790 589 ntBASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AP006547.1-201ENST00000563435 692 ntBASIC15.81■□□□□ 0.12
LMO3Q8TAP4 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AL136301.1-201ENST00000615830 422 ntBASIC15.81■□□□□ 0.12
LMO3Q8TAP4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AL035252.4-201ENST00000624174 288 ntBASIC15.81■□□□□ 0.12
LMO3Q8TAP4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LMO3Q8TAP4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 MIR326-201ENST00000362220 95 ntBASIC15.8■□□□□ 0.12
LMO3Q8TAP4 AC100850.1-201ENST00000506768 649 ntBASIC15.8■□□□□ 0.12
LMO3Q8TAP4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 AC079316.1-201ENST00000548397 411 ntBASIC15.8■□□□□ 0.12
LMO3Q8TAP4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 AC027237.1-201ENST00000560942 655 ntBASIC15.8■□□□□ 0.12
LMO3Q8TAP4 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LMO3Q8TAP4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LMO3Q8TAP4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms