Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AP001094.2-201ENST00000578897 2315 ntBASIC8.93□□□□□ -0.98
SVIPQ8NHG7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 UQCC1-205ENST00000374385 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 TP53-205ENST00000445888 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 TP53-225ENST00000619485 2506 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 XIRP2-205ENST00000409605 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 KIFAP3-206ENST00000538366 3159 ntTSL 2 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 WTAP-202ENST00000358372 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 CAPN10-AS1-201ENST00000567819 4000 ntBASIC8.93□□□□□ -0.98
SVIPQ8NHG7 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 SATB1-204ENST00000417717 4589 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SVIPQ8NHG7 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 DDR1-223ENST00000324771 4148 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 C8orf46-201ENST00000305454 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 RASGRP4-204ENST00000454404 3116 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 RPL15-210ENST00000456530 2835 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 B3GALT5-201ENST00000343118 2606 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 ASB8-205ENST00000536549 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 AL445665.1-201ENST00000322495 2599 ntTSL 2 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 PGR-207ENST00000534013 1901 ntTSL 2 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 TSN-202ENST00000409193 1436 ntTSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 AC091804.1-201ENST00000486888 567 ntBASIC8.92□□□□□ -0.98
SVIPQ8NHG7 AC024681.1-201ENST00000521917 487 ntBASIC8.92□□□□□ -0.98
SVIPQ8NHG7 AC022616.2-201ENST00000523185 300 ntBASIC8.92□□□□□ -0.98
SVIPQ8NHG7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 ARHGEF4-201ENST00000326016 3666 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 SLC38A3-206ENST00000614032 2978 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 PPP1R3C-201ENST00000238994 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 BBS9-202ENST00000350941 3899 ntTSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 AGBL2-203ENST00000525123 3577 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 AC091959.3-201ENST00000506502 3311 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 ELP3-218ENST00000524103 1914 ntTSL 2 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC8.92□□□□□ -0.98
SVIPQ8NHG7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 EIF2AK2-203ENST00000395127 4343 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 USP5-202ENST00000389231 3083 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 GABRR1-201ENST00000369451 1823 ntTSL 5 BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 AC141586.3-201ENST00000562166 1838 ntBASIC8.91□□□□□ -0.98
SVIPQ8NHG7 MPP2-220ENST00000622681 4242 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 HIPK2-203ENST00000428878 3969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 PMEPA1-203ENST00000347215 4546 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 FOXN4-201ENST00000299162 3350 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 AL133355.1-201ENST00000568017 2388 ntBASIC8.91□□□□□ -0.98
SVIPQ8NHG7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 ZNF423-207ENST00000567169 4017 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 ERC2-IT1-201ENST00000629461 2177 ntBASIC8.91□□□□□ -0.98
SVIPQ8NHG7 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
SVIPQ8NHG7 SMC4P1-201ENST00000414479 527 ntBASIC8.91□□□□□ -0.98
SVIPQ8NHG7 CDK7P1-201ENST00000434574 693 ntBASIC8.91□□□□□ -0.98
SVIPQ8NHG7 KRT19P4-201ENST00000443208 943 ntBASIC8.91□□□□□ -0.98
SVIPQ8NHG7 EARS2-207ENST00000563459 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms