Protein–RNA interactions for Protein: Q8N5U1

MS4A15, Membrane-spanning 4-domains subfamily A member 15, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A15Q8N5U1 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 HLA-K-203ENST00000430151 1046 ntBASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 GPS2P2-201ENST00000430745 888 ntBASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 AC004461.2-201ENST00000629517 803 ntBASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 AL513210.1-201ENST00000629608 234 ntBASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 RN7SL832P-201ENST00000607781 1756 ntBASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
MS4A15Q8N5U1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 TUBB3P1-201ENST00000405796 1332 ntBASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AC093525.8-201ENST00000624099 1342 ntBASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 MYADML-201ENST00000474610 2147 ntBASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 GAPDHP40-201ENST00000505218 1006 ntBASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 SDHAP3-202ENST00000515467 728 ntBASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 KRT126P-201ENST00000549467 1181 ntBASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AC092364.2-202ENST00000597012 1073 ntBASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 AC073548.1-201ENST00000624088 1882 ntBASIC13.18□□□□□ -0.3
MS4A15Q8N5U1 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms