Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCDC170Q8IYT3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 CICP17-201ENST00000418553 2377 ntBASIC16■□□□□ 0.15
CCDC170Q8IYT3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 MRPL37P1-201ENST00000592451 1337 ntBASIC16■□□□□ 0.15
CCDC170Q8IYT3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 TREML5P-201ENST00000421694 576 ntBASIC16■□□□□ 0.15
CCDC170Q8IYT3 AP000347.1-202ENST00000435868 847 ntBASIC16■□□□□ 0.15
CCDC170Q8IYT3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 AC004967.1-201ENST00000453589 447 ntBASIC16■□□□□ 0.15
CCDC170Q8IYT3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 AC135586.1-201ENST00000539323 574 ntBASIC16■□□□□ 0.15
CCDC170Q8IYT3 AC004449.1-201ENST00000564240 433 ntBASIC16■□□□□ 0.15
CCDC170Q8IYT3 AC007431.3-201ENST00000623221 587 ntBASIC16■□□□□ 0.15
CCDC170Q8IYT3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCDC170Q8IYT3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 MAPT-IT1-201ENST00000624111 3016 ntBASIC16■□□□□ 0.15
CCDC170Q8IYT3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCDC170Q8IYT3 AC087386.2-201ENST00000623212 4637 ntBASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 GIMAP3P-201ENST00000495150 836 ntBASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 BRI3BPP1-201ENST00000594224 787 ntBASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC170Q8IYT3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms