Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 MROH4P-201ENST00000431302 1578 ntBASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM48Q8IWZ4 FKBP4P6-201ENST00000457486 1332 ntBASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 AC026748.1-201ENST00000624349 3251 ntBASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 MIR1908-201ENST00000410394 80 ntBASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 BTBD6P1-201ENST00000412176 1267 ntBASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 MTX1P1-201ENST00000440904 838 ntBASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 RN7SL713P-201ENST00000582127 302 ntBASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 PPY2P-201ENST00000582808 702 ntBASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 AC004466.1-201ENST00000599515 1080 ntBASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 PPT1-215ENST00000641471 2368 ntBASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM48Q8IWZ4 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 KRT8P4-201ENST00000509735 1454 ntBASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 MIR326-201ENST00000362220 95 ntBASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 MESTP3-201ENST00000503460 968 ntBASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 AC106820.3-201ENST00000561653 397 ntBASIC14.65□□□□□ -0.06
TRIM48Q8IWZ4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms