Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 AP000593.2-201ENST00000542775 1433 ntBASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LYSMD3Q7Z3D4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 RN7SKP175-201ENST00000408472 289 ntBASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 COX5BP1-201ENST00000507622 393 ntBASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 AC079316.1-201ENST00000548397 411 ntBASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 AC073413.1-201ENST00000603927 732 ntBASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LYSMD3Q7Z3D4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 INTS4P1-203ENST00000641008 3683 ntBASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.96□□□□□ -0.02
LYSMD3Q7Z3D4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 CSF2RBP1-201ENST00000447905 391 ntBASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.95□□□□□ -0.02
LYSMD3Q7Z3D4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms