Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP50Q70EL3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
USP50Q70EL3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
USP50Q70EL3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
USP50Q70EL3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
USP50Q70EL3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
USP50Q70EL3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.1■□□□□ 0.33
USP50Q70EL3 OR7E115P-201ENST00000382617 1024 ntBASIC17.1■□□□□ 0.33
USP50Q70EL3 AC006987.1-201ENST00000413610 527 ntBASIC17.1■□□□□ 0.33
USP50Q70EL3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.1■□□□□ 0.33
USP50Q70EL3 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 RN7SL288P-201ENST00000490496 291 ntBASIC17.1■□□□□ 0.33
USP50Q70EL3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
USP50Q70EL3 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.1■□□□□ 0.33
USP50Q70EL3 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.1■□□□□ 0.33
USP50Q70EL3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
USP50Q70EL3 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.1■□□□□ 0.33
USP50Q70EL3 RN7SL121P-201ENST00000584223 273 ntBASIC17.1■□□□□ 0.33
USP50Q70EL3 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.1■□□□□ 0.33
USP50Q70EL3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.1■□□□□ 0.33
USP50Q70EL3 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.1■□□□□ 0.33
USP50Q70EL3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
USP50Q70EL3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
USP50Q70EL3 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.1■□□□□ 0.33
USP50Q70EL3 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.1■□□□□ 0.33
USP50Q70EL3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP50Q70EL3 PRAL-201ENST00000624952 3286 ntBASIC17.09■□□□□ 0.33
USP50Q70EL3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.09■□□□□ 0.33
USP50Q70EL3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
USP50Q70EL3 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.09■□□□□ 0.33
USP50Q70EL3 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.09■□□□□ 0.33
USP50Q70EL3 KRT18P4-201ENST00000422599 1288 ntBASIC17.09■□□□□ 0.33
USP50Q70EL3 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC17.09■□□□□ 0.33
USP50Q70EL3 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
USP50Q70EL3 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.09■□□□□ 0.33
USP50Q70EL3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.09■□□□□ 0.33
USP50Q70EL3 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC17.09■□□□□ 0.33
USP50Q70EL3 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.09■□□□□ 0.33
USP50Q70EL3 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.09■□□□□ 0.33
USP50Q70EL3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP50Q70EL3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP50Q70EL3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 AC006504.5-208ENST00000588784 2401 ntBASIC17.09■□□□□ 0.33
USP50Q70EL3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
USP50Q70EL3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP50Q70EL3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.09■□□□□ 0.33
USP50Q70EL3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.08■□□□□ 0.33
USP50Q70EL3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP50Q70EL3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
USP50Q70EL3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP50Q70EL3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.08■□□□□ 0.33
USP50Q70EL3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.08■□□□□ 0.33
USP50Q70EL3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP50Q70EL3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.08■□□□□ 0.33
USP50Q70EL3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.08■□□□□ 0.33
USP50Q70EL3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
USP50Q70EL3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP50Q70EL3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.08■□□□□ 0.32
USP50Q70EL3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms