Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC41PQ6P2S7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 FAM21FP-201ENST00000426241 1131 ntBASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 MIR4741-201ENST00000579822 90 ntBASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.96■□□□□ 0.46
TTC41PQ6P2S7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 PCDHA3-202ENST00000532566 4594 ntBASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 AC152010.1-201ENST00000415779 2006 ntBASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 BNIP3P42-201ENST00000454982 569 ntBASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 BNIP3P29-201ENST00000598302 571 ntBASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 AC011447.5-201ENST00000616168 564 ntBASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC41PQ6P2S7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC41PQ6P2S7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms