Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.28□□□□□ -0.6
MRPL54Q6P161 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
MRPL54Q6P161 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC11.27□□□□□ -0.6
MRPL54Q6P161 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
MRPL54Q6P161 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL54Q6P161 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.27□□□□□ -0.6
MRPL54Q6P161 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.27□□□□□ -0.6
MRPL54Q6P161 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL54Q6P161 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL54Q6P161 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.27□□□□□ -0.6
MRPL54Q6P161 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL54Q6P161 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL54Q6P161 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL54Q6P161 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
MRPL54Q6P161 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 PCED1CP-201ENST00000419887 785 ntBASIC11.27□□□□□ -0.61
MRPL54Q6P161 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 NPAP1P7-201ENST00000613027 823 ntBASIC11.27□□□□□ -0.61
MRPL54Q6P161 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 IER3-202ENST00000376377 1350 ntBASIC11.27□□□□□ -0.61
MRPL54Q6P161 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.27□□□□□ -0.61
MRPL54Q6P161 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL54Q6P161 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL54Q6P161 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
MRPL54Q6P161 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms