Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AC126335.2-201ENST00000623362 4637 ntBASIC13.9□□□□□ -0.18
REEP3Q6NUK4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 AC010327.5-201ENST00000586923 3061 ntBASIC13.9□□□□□ -0.18
REEP3Q6NUK4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
REEP3Q6NUK4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
REEP3Q6NUK4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 INE2-201ENST00000630399 1874 ntBASIC13.89□□□□□ -0.19
REEP3Q6NUK4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.89□□□□□ -0.19
REEP3Q6NUK4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.89□□□□□ -0.19
REEP3Q6NUK4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 AC005498.2-205ENST00000593218 784 ntBASIC13.89□□□□□ -0.19
REEP3Q6NUK4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 AC133539.2-201ENST00000604757 467 ntBASIC13.89□□□□□ -0.19
REEP3Q6NUK4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
REEP3Q6NUK4 AC104581.4-201ENST00000623126 3052 ntBASIC13.89□□□□□ -0.19
REEP3Q6NUK4 MRPL37P1-201ENST00000592451 1337 ntBASIC13.89□□□□□ -0.19
REEP3Q6NUK4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 ACTBP8-201ENST00000403258 1108 ntBASIC13.88□□□□□ -0.19
REEP3Q6NUK4 DFFBP1-201ENST00000433250 979 ntBASIC13.88□□□□□ -0.19
REEP3Q6NUK4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 RNA5SP421-201ENST00000516864 134 ntBASIC13.88□□□□□ -0.19
REEP3Q6NUK4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 AC123567.1-201ENST00000548294 1261 ntBASIC13.88□□□□□ -0.19
REEP3Q6NUK4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
REEP3Q6NUK4 MIR6074-201ENST00000612054 107 ntBASIC13.88□□□□□ -0.19
REEP3Q6NUK4 AC009118.2-201ENST00000613275 655 ntBASIC13.88□□□□□ -0.19
REEP3Q6NUK4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms