Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 AJ011931.1-201ENST00000618749 2492 ntBASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 AC006001.1-201ENST00000325130 474 ntBASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 AC112492.5-201ENST00000421897 457 ntBASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 CTBP2P5-201ENST00000454986 1264 ntBASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 AC133552.6-201ENST00000613406 534 ntBASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 TNRC18P2-201ENST00000417666 2714 ntBASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 CLUHP2-201ENST00000426660 1303 ntBASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 FKBP4P6-201ENST00000457486 1332 ntBASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CCDC144NLQ6NUI1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 AP002414.2-201ENST00000591780 3365 ntBASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 OR8S1-201ENST00000310194 1080 ntBASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 AC138696.2-201ENST00000607376 223 ntBASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.1□□□□□ -0.47
CCDC144NLQ6NUI1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms