Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 BAK1P1-201ENST00000317045 636 ntBASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 HLA-DMA-203ENST00000395305 777 ntBASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 ALG1L13P-202ENST00000519320 584 ntBASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 AC141586.1-203ENST00000567242 366 ntBASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 AC138466.4-201ENST00000623965 852 ntBASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 KRT8P28-201ENST00000433288 1390 ntBASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LYSMD4Q5XG99 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 ALG1L6P-201ENST00000515248 758 ntBASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 CR383656.3-201ENST00000551315 183 ntBASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 AC092135.3-201ENST00000624151 1846 ntBASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 AC126365.1-201ENST00000578585 1514 ntBASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 C18orf15-201ENST00000623680 2534 ntBASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD4Q5XG99 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LYSMD4Q5XG99 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms