Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 AL512356.2-201ENST00000546955 174 ntBASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 AC092364.2-202ENST00000597012 1073 ntBASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LINC00242Q5T6M2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AL138799.1-201ENST00000448213 1675 ntBASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC10.19□□□□□ -0.78
LINC00242Q5T6M2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms