Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 AL627231.1-201ENST00000394467 1125 ntBASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 RCC2P8-201ENST00000502779 1035 ntBASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 CTBP2P4-201ENST00000513884 920 ntBASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 DUX4L46-201ENST00000566845 751 ntBASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 C18orf15-201ENST00000623680 2534 ntBASIC15.86■□□□□ 0.13
CTC1Q2NKJ3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AC139749.1-202ENST00000617529 3139 ntBASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 RN7SKP175-201ENST00000408472 289 ntBASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AC010141.1-201ENST00000411585 623 ntBASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 VDAC1P1-201ENST00000439229 848 ntBASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 SHC1P1-201ENST00000425230 1745 ntBASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms