Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.37■□□□□ 0.37
IRX3P78415 DUX4L46-201ENST00000566845 751 ntBASIC17.37■□□□□ 0.37
IRX3P78415 MIR4783-201ENST00000580343 82 ntBASIC17.37■□□□□ 0.37
IRX3P78415 AL133499.1-201ENST00000596207 608 ntBASIC17.37■□□□□ 0.37
IRX3P78415 AC138696.2-201ENST00000607376 223 ntBASIC17.37■□□□□ 0.37
IRX3P78415 U62317.3-201ENST00000608319 855 ntBASIC17.37■□□□□ 0.37
IRX3P78415 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
IRX3P78415 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.37■□□□□ 0.37
IRX3P78415 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.37■□□□□ 0.37
IRX3P78415 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
IRX3P78415 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.37■□□□□ 0.37
IRX3P78415 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IRX3P78415 E2F3P2-201ENST00000447755 1422 ntBASIC17.37■□□□□ 0.37
IRX3P78415 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.37■□□□□ 0.37
IRX3P78415 AC009093.2-202ENST00000620513 2079 ntBASIC17.36■□□□□ 0.37
IRX3P78415 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.36■□□□□ 0.37
IRX3P78415 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 AP002414.2-201ENST00000591780 3365 ntBASIC17.36■□□□□ 0.37
IRX3P78415 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 INE2-201ENST00000630399 1874 ntBASIC17.36■□□□□ 0.37
IRX3P78415 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.36■□□□□ 0.37
IRX3P78415 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
IRX3P78415 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
IRX3P78415 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.36■□□□□ 0.37
IRX3P78415 FAM58BP-201ENST00000439056 645 ntBASIC17.36■□□□□ 0.37
IRX3P78415 AC006335.1-201ENST00000445200 547 ntBASIC17.36■□□□□ 0.37
IRX3P78415 PUDPP3-201ENST00000445368 636 ntBASIC17.36■□□□□ 0.37
IRX3P78415 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.36■□□□□ 0.37
IRX3P78415 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.36■□□□□ 0.37
IRX3P78415 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.36■□□□□ 0.37
IRX3P78415 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IRX3P78415 PRKXP1-201ENST00000561423 1122 ntBASIC17.36■□□□□ 0.37
IRX3P78415 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
IRX3P78415 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
IRX3P78415 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IRX3P78415 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
IRX3P78415 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 AC011840.2-201ENST00000563063 1520 ntBASIC17.36■□□□□ 0.37
IRX3P78415 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.36■□□□□ 0.37
IRX3P78415 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
IRX3P78415 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
IRX3P78415 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
IRX3P78415 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.35■□□□□ 0.37
IRX3P78415 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.35■□□□□ 0.37
IRX3P78415 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.35■□□□□ 0.37
IRX3P78415 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
IRX3P78415 RPL18P13-201ENST00000478088 569 ntBASIC17.35■□□□□ 0.37
IRX3P78415 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.35■□□□□ 0.37
IRX3P78415 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms