Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAE1P78406 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAE1P78406 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAE1P78406 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAE1P78406 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAE1P78406 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAE1P78406 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAE1P78406 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAE1P78406 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAE1P78406 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.05□□□□□ -0.16
RAE1P78406 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.05□□□□□ -0.16
RAE1P78406 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.05□□□□□ -0.16
RAE1P78406 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RAE1P78406 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAE1P78406 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.05□□□□□ -0.16
RAE1P78406 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RAE1P78406 AL512384.1-201ENST00000406683 331 ntBASIC14.05□□□□□ -0.16
RAE1P78406 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.05□□□□□ -0.16
RAE1P78406 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 TTTY23B-201ENST00000442790 549 ntBASIC14.05□□□□□ -0.16
RAE1P78406 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.05□□□□□ -0.16
RAE1P78406 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.05□□□□□ -0.16
RAE1P78406 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 MIR4683-201ENST00000579659 81 ntBASIC14.05□□□□□ -0.16
RAE1P78406 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.05□□□□□ -0.16
RAE1P78406 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
RAE1P78406 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAE1P78406 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 AC011474.4-201ENST00000623523 2076 ntBASIC14.05□□□□□ -0.16
RAE1P78406 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.05□□□□□ -0.16
RAE1P78406 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAE1P78406 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAE1P78406 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RAE1P78406 MST1P2-201ENST00000457982 2291 ntBASIC14.04□□□□□ -0.16
RAE1P78406 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.04□□□□□ -0.16
RAE1P78406 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.04□□□□□ -0.16
RAE1P78406 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.04□□□□□ -0.16
RAE1P78406 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.04□□□□□ -0.16
RAE1P78406 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAE1P78406 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.04□□□□□ -0.16
RAE1P78406 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.04□□□□□ -0.16
RAE1P78406 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.04□□□□□ -0.16
RAE1P78406 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 CNN2P8-201ENST00000421872 913 ntBASIC14.04□□□□□ -0.16
RAE1P78406 FAM8A4P-201ENST00000435433 1213 ntBASIC14.04□□□□□ -0.16
RAE1P78406 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.04□□□□□ -0.16
RAE1P78406 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.04□□□□□ -0.16
RAE1P78406 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.04□□□□□ -0.16
RAE1P78406 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.04□□□□□ -0.16
RAE1P78406 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.04□□□□□ -0.16
RAE1P78406 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.04□□□□□ -0.16
RAE1P78406 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RAE1P78406 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.04□□□□□ -0.16
RAE1P78406 AC078819.1-201ENST00000547454 765 ntBASIC14.04□□□□□ -0.16
RAE1P78406 AC012085.1-201ENST00000548270 765 ntBASIC14.04□□□□□ -0.16
RAE1P78406 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.04□□□□□ -0.16
RAE1P78406 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RAE1P78406 BTNL10-201ENST00000595971 695 ntBASIC14.04□□□□□ -0.16
RAE1P78406 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.04□□□□□ -0.16
RAE1P78406 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.04□□□□□ -0.16
RAE1P78406 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAE1P78406 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms