Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.74■□□□□ 0.27
CCNA1P78396 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.74■□□□□ 0.27
CCNA1P78396 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.74■□□□□ 0.27
CCNA1P78396 AL590440.2-201ENST00000641973 1595 ntBASIC16.74■□□□□ 0.27
CCNA1P78396 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNA1P78396 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCNA1P78396 OR2R1P-201ENST00000441404 914 ntBASIC16.74■□□□□ 0.27
CCNA1P78396 FTH1P22-201ENST00000456305 520 ntBASIC16.74■□□□□ 0.27
CCNA1P78396 CTBP2P4-201ENST00000513884 920 ntBASIC16.74■□□□□ 0.27
CCNA1P78396 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCNA1P78396 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.74■□□□□ 0.27
CCNA1P78396 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.74■□□□□ 0.27
CCNA1P78396 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNA1P78396 AC009560.1-201ENST00000620208 434 ntBASIC16.74■□□□□ 0.27
CCNA1P78396 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNA1P78396 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.74■□□□□ 0.27
CCNA1P78396 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCNA1P78396 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.74■□□□□ 0.27
CCNA1P78396 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCNA1P78396 KRT8P28-201ENST00000433288 1390 ntBASIC16.74■□□□□ 0.27
CCNA1P78396 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCNA1P78396 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCNA1P78396 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CCNA1P78396 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.74■□□□□ 0.27
CCNA1P78396 LINC01101-201ENST00000622953 1884 ntBASIC16.73■□□□□ 0.27
CCNA1P78396 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNA1P78396 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNA1P78396 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNA1P78396 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CCNA1P78396 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNA1P78396 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNA1P78396 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.73■□□□□ 0.27
CCNA1P78396 NDUFS6P1-201ENST00000485187 316 ntBASIC16.73■□□□□ 0.27
CCNA1P78396 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNA1P78396 AP003398.1-201ENST00000531124 318 ntBASIC16.73■□□□□ 0.27
CCNA1P78396 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.73■□□□□ 0.27
CCNA1P78396 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNA1P78396 RPL17P45-201ENST00000586289 509 ntBASIC16.73■□□□□ 0.27
CCNA1P78396 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.73■□□□□ 0.27
CCNA1P78396 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.73■□□□□ 0.27
CCNA1P78396 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCNA1P78396 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 MARK2P16-201ENST00000605714 1723 ntBASIC16.73■□□□□ 0.27
CCNA1P78396 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCNA1P78396 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCNA1P78396 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.72■□□□□ 0.27
CCNA1P78396 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.72■□□□□ 0.27
CCNA1P78396 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CCNA1P78396 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.72■□□□□ 0.27
CCNA1P78396 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
CCNA1P78396 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CCNA1P78396 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.72■□□□□ 0.27
CCNA1P78396 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.72■□□□□ 0.27
CCNA1P78396 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.72■□□□□ 0.27
CCNA1P78396 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.72■□□□□ 0.27
CCNA1P78396 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 AC018463.1-201ENST00000456674 917 ntBASIC16.72■□□□□ 0.27
CCNA1P78396 RPL18AP3-201ENST00000462885 528 ntBASIC16.72■□□□□ 0.27
CCNA1P78396 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.72■□□□□ 0.27
CCNA1P78396 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.72■□□□□ 0.27
CCNA1P78396 NUDT4P2-201ENST00000578341 546 ntBASIC16.72■□□□□ 0.27
CCNA1P78396 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.72■□□□□ 0.27
CCNA1P78396 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.72■□□□□ 0.27
CCNA1P78396 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.72■□□□□ 0.27
CCNA1P78396 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCNA1P78396 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms