Protein–RNA interactions for Protein: P57682

KLF3, Krueppel-like factor 3, humanhuman

Predicted RBP Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3P57682 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KLF3P57682 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KLF3P57682 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KLF3P57682 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
KLF3P57682 AC006058.4-201ENST00000624016 1670 ntBASIC12.82□□□□□ -0.36
KLF3P57682 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KLF3P57682 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
KLF3P57682 AL138725.1-201ENST00000407347 1314 ntBASIC12.82□□□□□ -0.36
KLF3P57682 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KLF3P57682 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
KLF3P57682 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KLF3P57682 AC011840.2-201ENST00000563063 1520 ntBASIC12.82□□□□□ -0.36
KLF3P57682 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KLF3P57682 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 KRT8P4-201ENST00000509735 1454 ntBASIC12.81□□□□□ -0.36
KLF3P57682 AC003102.2-201ENST00000589195 1469 ntBASIC12.81□□□□□ -0.36
KLF3P57682 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
KLF3P57682 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 AL136309.1-201ENST00000403917 691 ntBASIC12.81□□□□□ -0.36
KLF3P57682 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.81□□□□□ -0.36
KLF3P57682 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.81□□□□□ -0.36
KLF3P57682 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 C2orf69P2-201ENST00000562032 1123 ntBASIC12.81□□□□□ -0.36
KLF3P57682 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.81□□□□□ -0.36
KLF3P57682 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.81□□□□□ -0.36
KLF3P57682 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.81□□□□□ -0.36
KLF3P57682 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.81□□□□□ -0.36
KLF3P57682 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 AC073413.1-201ENST00000603927 732 ntBASIC12.81□□□□□ -0.36
KLF3P57682 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.81□□□□□ -0.36
KLF3P57682 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 LINC00528-201ENST00000600723 2160 ntBASIC12.81□□□□□ -0.36
KLF3P57682 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.81□□□□□ -0.36
KLF3P57682 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
KLF3P57682 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.81□□□□□ -0.36
KLF3P57682 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.81□□□□□ -0.36
KLF3P57682 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.81□□□□□ -0.36
KLF3P57682 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KLF3P57682 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 AL359183.1-201ENST00000623796 2132 ntBASIC12.8□□□□□ -0.36
KLF3P57682 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.8□□□□□ -0.36
KLF3P57682 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.8□□□□□ -0.36
KLF3P57682 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
KLF3P57682 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.8□□□□□ -0.36
KLF3P57682 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.8□□□□□ -0.36
KLF3P57682 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
KLF3P57682 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms