Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN6P56747 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLDN6P56747 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.24□□□□□ -0.13
CLDN6P56747 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.24□□□□□ -0.13
CLDN6P56747 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.24□□□□□ -0.13
CLDN6P56747 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN6P56747 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN6P56747 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLDN6P56747 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.23□□□□□ -0.13
CLDN6P56747 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN6P56747 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN6P56747 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.23□□□□□ -0.13
CLDN6P56747 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN6P56747 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN6P56747 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
CLDN6P56747 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLDN6P56747 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLDN6P56747 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN6P56747 AC026320.2-201ENST00000434379 478 ntBASIC14.23□□□□□ -0.13
CLDN6P56747 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN6P56747 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.23□□□□□ -0.13
CLDN6P56747 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN6P56747 RPL17P45-201ENST00000586289 509 ntBASIC14.23□□□□□ -0.13
CLDN6P56747 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN6P56747 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN6P56747 AC013726.1-201ENST00000563747 2285 ntBASIC14.23□□□□□ -0.13
CLDN6P56747 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CLDN6P56747 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN6P56747 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 AC092384.3-202ENST00000564646 2873 ntBASIC14.23□□□□□ -0.13
CLDN6P56747 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN6P56747 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN6P56747 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN6P56747 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLDN6P56747 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN6P56747 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN6P56747 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLDN6P56747 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN6P56747 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN6P56747 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN6P56747 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLDN6P56747 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLDN6P56747 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN6P56747 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN6P56747 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms