Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PER3P56645 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PER3P56645 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.89□□□□□ -0.19
PER3P56645 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.89□□□□□ -0.19
PER3P56645 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
PER3P56645 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.89□□□□□ -0.19
PER3P56645 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.89□□□□□ -0.19
PER3P56645 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.89□□□□□ -0.19
PER3P56645 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.89□□□□□ -0.19
PER3P56645 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.89□□□□□ -0.19
PER3P56645 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.89□□□□□ -0.19
PER3P56645 UPF3AP2-201ENST00000457924 1132 ntBASIC13.89□□□□□ -0.19
PER3P56645 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.89□□□□□ -0.19
PER3P56645 AP001582.1-201ENST00000525856 295 ntBASIC13.89□□□□□ -0.19
PER3P56645 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.89□□□□□ -0.19
PER3P56645 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.89□□□□□ -0.19
PER3P56645 AC015910.1-201ENST00000579400 975 ntBASIC13.89□□□□□ -0.19
PER3P56645 EEF1DP1-201ENST00000585891 896 ntBASIC13.89□□□□□ -0.19
PER3P56645 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.89□□□□□ -0.19
PER3P56645 AC000095.1-201ENST00000603208 874 ntBASIC13.89□□□□□ -0.19
PER3P56645 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PER3P56645 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.89□□□□□ -0.19
PER3P56645 MIR6727-201ENST00000620702 65 ntBASIC13.89□□□□□ -0.19
PER3P56645 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.89□□□□□ -0.19
PER3P56645 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
PER3P56645 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.89□□□□□ -0.19
PER3P56645 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PER3P56645 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.89□□□□□ -0.19
PER3P56645 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.88□□□□□ -0.19
PER3P56645 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.88□□□□□ -0.19
PER3P56645 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PER3P56645 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.88□□□□□ -0.19
PER3P56645 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.88□□□□□ -0.19
PER3P56645 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.88□□□□□ -0.19
PER3P56645 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.88□□□□□ -0.19
PER3P56645 AL591846.1-201ENST00000451736 433 ntBASIC13.88□□□□□ -0.19
PER3P56645 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.88□□□□□ -0.19
PER3P56645 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.88□□□□□ -0.19
PER3P56645 AP006547.1-201ENST00000563435 692 ntBASIC13.88□□□□□ -0.19
PER3P56645 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 GNRHR2-203ENST00000581100 1187 ntBASIC13.88□□□□□ -0.19
PER3P56645 AC104982.3-201ENST00000581995 514 ntBASIC13.88□□□□□ -0.19
PER3P56645 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.88□□□□□ -0.19
PER3P56645 AC132938.4-201ENST00000623835 848 ntBASIC13.88□□□□□ -0.19
PER3P56645 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PER3P56645 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.88□□□□□ -0.19
PER3P56645 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms